HL_7K52_112
3D structure
- PDB id
- 7K52 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Near post-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure III)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- UGGAAACG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7K52_112 not in the Motif Atlas
- Homologous match to HL_6CZR_215
- Geometric discrepancy: 0.3625
- The information below is about HL_6CZR_215
- Detailed Annotation
- GNRA with extra near cWW
- Broad Annotation
- GNRA with extra near cWW
- Motif group
- HL_82182.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 21
Unit IDs
7K52|1|3|U|157
7K52|1|3|G|158
7K52|1|3|G|159
7K52|1|3|A|160
7K52|1|3|A|161
7K52|1|3|A|162
7K52|1|3|C|163
7K52|1|3|G|164
Current chains
- Chain 3
- 16S ribosomal RNA
Nearby chains
- Chain Y
- 30S ribosomal protein S20
- Chain p
- 50S ribosomal protein L19
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