HL_7K53_014

3D structure

PDB id

7K53 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation +1-frameshifting(CCC-A) complex (Structure I-FS)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CGGCGAG

Length

7 nucleotides

Bulged bases

7K53|1|1|C|490

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7K53_014 not in the Motif Atlas

Homologous match to HL_5J7L_148

Geometric discrepancy: 0.1576

The information below is about HL_5J7L_148

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

7K53|1|1|C|487
7K53|1|1|G|488
7K53|1|1|G|489
7K53|1|1|C|490
7K53|1|1|G|491
7K53|1|1|A|492
7K53|1|1|G|493

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain s

50S ribosomal protein L22

Chain u

50S ribosomal protein L24