HL_7K53_075

3D structure

PDB id

7K53 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation +1-frameshifting(CCC-A) complex (Structure I-FS)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CCUUCGGG

Length

8 nucleotides

Bulged bases

7K53|1|3|U|209

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7K53_075 not in the Motif Atlas

Geometric match to HL_4WSB_001

Geometric discrepancy: 0.3944

The information below is about HL_4WSB_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19413.2

Basepair signature

cWW-cSW-F

Number of instances in this motif group

9

Unit IDs

7K53|1|3|C|206
7K53|1|3|C|207
7K53|1|3|U|208
7K53|1|3|U|209
7K53|1|3|C|210
7K53|1|3|G|211
7K53|1|3|G|212
7K53|1|3|G|213

Current chains

Chain 3

16S ribosomal RNA

Nearby chains