HL_7K54_003

3D structure

PDB id

7K54 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mid-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure II-FS)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGAAAC

Length

6 nucleotides

Bulged bases

7K54|1|1|A|125

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7K54_003 not in the Motif Atlas

Homologous match to HL_5J7L_136

Geometric discrepancy: 0.1071

The information below is about HL_5J7L_136

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_82710.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

7K54|1|1|G|123
7K54|1|1|G|124
7K54|1|1|A|125
7K54|1|1|A|126
7K54|1|1|A|127
7K54|1|1|C|128

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain D

50S ribosomal protein L34

Chain t

50S ribosomal protein L23