3D structure

PDB id
7K54 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mid-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure II-FS)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
CUUCGG
Length
6 nucleotides
Bulged bases
7K54|1|1|U|1693
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7K54_041 not in the Motif Atlas
Homologous match to HL_7RQB_042
Geometric discrepancy: 0.1202
The information below is about HL_7RQB_042
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_03562.2
Basepair signature
cWW-tSW-F
Number of instances in this motif group
56

Unit IDs

7K54|1|1|C|1691
7K54|1|1|U|1692
7K54|1|1|U|1693
7K54|1|1|C|1694
7K54|1|1|G|1695
7K54|1|1|G|1696

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain 3
Small subunit ribosomal RNA; SSU rRNA
Chain b
50S ribosomal protein L2

Coloring options:


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