HL_7K54_106
3D structure
- PDB id
- 7K54 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mid-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure II-FS)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GGCUCAUAACC
- Length
- 11 nucleotides
- Bulged bases
- 7K54|1|6|U|33
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7K54_106 not in the Motif Atlas
- Homologous match to HL_4WSM_225
- Geometric discrepancy: 0.4612
- The information below is about HL_4WSM_225
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_36684.4
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
7K54|1|6|G|30
7K54|1|6|G|31
7K54|1|6|C|32
7K54|1|6|U|33
7K54|1|6|C|34
7K54|1|6|A|35
7K54|1|6|U|36
7K54|1|6|A|37
7K54|1|6|A|38
7K54|1|6|C|39
7K54|1|6|C|40
Current chains
- Chain 6
- tRNAfMet
Nearby chains
- Chain 3
- Small subunit ribosomal RNA; SSU rRNA
- Chain 4
- mRNA
- Chain 5
- Transfer RNA; tRNA
- Chain N
- 30S ribosomal protein S9
- Chain P
- 30S ribosomal protein S11
- Chain R
- 30S ribosomal protein S13
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