HL_7K55_012

3D structure

PDB id

7K55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Near post-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure III-FS)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GGACCAUC

Length

8 nucleotides

Bulged bases

7K55|1|1|G|411

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7K55_012 not in the Motif Atlas

Homologous match to HL_7A0S_014

Geometric discrepancy: 0.098

The information below is about HL_7A0S_014

Detailed Annotation

Pseudoknot geometry

Broad Annotation

No text annotation

Motif group

HL_30680.5

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7K55|1|1|G|410
7K55|1|1|G|411
7K55|1|1|A|412
7K55|1|1|C|413
7K55|1|1|C|414
7K55|1|1|A|415
7K55|1|1|U|416
7K55|1|1|C|417

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain l

50S ribosomal protein L15