HL_7K9E_006

3D structure

PDB id

7K9E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Bacillus halodurans OapB in complex with its OLE RNA target (crystal form II)

Experimental method

X-RAY DIFFRACTION

Resolution

2.1 Å

Loop

Sequence

GGAAAUC

Length

7 nucleotides

Bulged bases

7K9E|1|D|U|533

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7K9E_006 not in the Motif Atlas

Geometric match to HL_4V9F_016

Geometric discrepancy: 0.2256

The information below is about HL_4V9F_016

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.5

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

428

Unit IDs

7K9E|1|D|G|528
7K9E|1|D|G|529
7K9E|1|D|A|530
7K9E|1|D|A|531
7K9E|1|D|A|532
7K9E|1|D|U|533
7K9E|1|D|C|534

Current chains

Chain D

OLE* RNA

Nearby chains