HL_7KGB_092

3D structure

PDB id

7KGB (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of A2296-methylated Mycobacterium tuberculosis ribosome bound with SEQ-9

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CUUCCUUG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7KGB_092 not in the Motif Atlas

Geometric match to HL_8C3A_022

Geometric discrepancy: 0.2089

The information below is about HL_8C3A_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

7KGB|1|a|C|832
7KGB|1|a|U|833
7KGB|1|a|U|834
7KGB|1|a|C|835
7KGB|1|a|C|836
7KGB|1|a|U|837
7KGB|1|a|U|838
7KGB|1|a|G|839

Current chains

Chain a

16S rRNA

Nearby chains

Chain r

30S ribosomal protein S18 1