HL_7L08_009

3D structure

PDB id

7L08 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human 55S mitoribosome-RRFmt complex.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

GCGACAAAC

Length

9 nucleotides

Bulged bases

7L08|1|A|A|1991, 7L08|1|A|A|1994

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7L08_009 not in the Motif Atlas

Geometric match to HL_5TBW_021

Geometric discrepancy: 0.2645

The information below is about HL_5TBW_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56443.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7L08|1|A|G|1988
7L08|1|A|C|1989
7L08|1|A|G|1990
7L08|1|A|A|1991
7L08|1|A|C|1992
7L08|1|A|A|1993
7L08|1|A|A|1994
7L08|1|A|A|1995
7L08|1|A|C|1996

Current chains

Chain A

16S RRNA

Nearby chains

Chain 2

39S ribosomal protein L34, mitochondrial

Chain D

39S ribosomal protein L2, mitochondrial

Chain d

39S ribosomal protein L45, mitochondrial