HL_7L08_024

3D structure

PDB id

7L08 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human 55S mitoribosome-RRFmt complex.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

GUACCCUAAC

Length

10 nucleotides

Bulged bases

7L08|1|A|A|2576

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7L08_024 not in the Motif Atlas

Geometric match to HL_5WTI_001

Geometric discrepancy: 0.3492

The information below is about HL_5WTI_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_08100.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

7L08|1|A|G|2574
7L08|1|A|U|2575
7L08|1|A|A|2576
7L08|1|A|C|2577
7L08|1|A|C|2578
7L08|1|A|C|2579
7L08|1|A|U|2580
7L08|1|A|A|2581
7L08|1|A|A|2582
7L08|1|A|C|2583

Current chains

Chain A

16S RRNA

Nearby chains

Chain AA

Small subunit ribosomal RNA; SSU rRNA

Chain z

Ribosome-recycling factor, mitochondrial