HL_7L08_028

3D structure

PDB id

7L08 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human 55S mitoribosome-RRFmt complex.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

UUGGGGCGA

Length

9 nucleotides

Bulged bases

7L08|1|A|G|2814

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7L08_028 not in the Motif Atlas

Homologous match to HL_7A0S_052

Geometric discrepancy: 0.1201

The information below is about HL_7A0S_052

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_11974.1

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7L08|1|A|U|2812
7L08|1|A|U|2813
7L08|1|A|G|2814
7L08|1|A|G|2815
7L08|1|A|G|2816
7L08|1|A|G|2817
7L08|1|A|C|2818
7L08|1|A|G|2819
7L08|1|A|A|2820

Current chains

Chain A

16S RRNA

Nearby chains

Chain N

39S ribosomal protein L16, mitochondrial

Chain W

39S ribosomal protein L27, mitochondrial

Chain z

Ribosome-recycling factor, mitochondrial