HL_7L08_053

3D structure

PDB id

7L08 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human 55S mitoribosome-RRFmt complex.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

GAUAAACCCC

Length

10 nucleotides

Bulged bases

7L08|1|AA|C|1225

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7L08_053 not in the Motif Atlas

Homologous match to HL_5J7L_021

Geometric discrepancy: 0.4442

The information below is about HL_5J7L_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50779.4

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

4

Unit IDs

7L08|1|AA|G|1217
7L08|1|AA|A|1218
7L08|1|AA|U|1219
7L08|1|AA|A|1220
7L08|1|AA|A|1221
7L08|1|AA|A|1222
7L08|1|AA|C|1223
7L08|1|AA|C|1224
7L08|1|AA|C|1225
7L08|1|AA|C|1226

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AG

28S ribosomal protein S9, mitochondrial

Chain AH

28S ribosomal protein S10, mitochondrial

Chain AK

28S ribosomal protein S14, mitochondrial