3D structure

PDB id
7L08 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of the human 55S mitoribosome-RRFmt complex.
Experimental method
ELECTRON MICROSCOPY
Resolution
3.49 Å

Loop

Sequence
CCCACG
Length
6 nucleotides
Bulged bases
7L08|1|AA|C|1311
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7L08_055 not in the Motif Atlas
Geometric match to HL_8C3A_022
Geometric discrepancy: 0.288
The information below is about HL_8C3A_022
Detailed Annotation
Externally structured
Broad Annotation
Externally structured
Motif group
HL_96426.1
Basepair signature
cWW-F
Number of instances in this motif group
4

Unit IDs

7L08|1|AA|C|1310
7L08|1|AA|C|1311
7L08|1|AA|C|1312
7L08|1|AA|A|1313
7L08|1|AA|C|1314
7L08|1|AA|G|1315

Current chains

Chain AA
12S rRNA

Nearby chains

Chain AF
28S ribosomal protein S7, mitochondrial
Chain AG
28S ribosomal protein S9, mitochondrial
Chain AH
28S ribosomal protein S10, mitochondrial
Chain AK
28S ribosomal protein S14, mitochondrial

Coloring options:


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