HL_7L20_009

3D structure

PDB id

7L20 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human 39S mitoribosomal subunit in complex with RRFmt and EF-G2mt.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.15 Å

Loop

Sequence

GCGACAAAC

Length

9 nucleotides

Bulged bases

7L20|1|A|A|1991, 7L20|1|A|A|1994

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7L20_009 not in the Motif Atlas

Geometric match to HL_5TBW_021

Geometric discrepancy: 0.2701

The information below is about HL_5TBW_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56443.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7L20|1|A|G|1988
7L20|1|A|C|1989
7L20|1|A|G|1990
7L20|1|A|A|1991
7L20|1|A|C|1992
7L20|1|A|A|1993
7L20|1|A|A|1994
7L20|1|A|A|1995
7L20|1|A|C|1996

Current chains

Chain A

16S rRNA mitochondrial

Nearby chains

Chain 2

39S ribosomal protein L34, mitochondrial

Chain D

39S ribosomal protein L2, mitochondrial

Chain d

39S ribosomal protein L45, mitochondrial