HL_7L20_025

3D structure

PDB id

7L20 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human 39S mitoribosomal subunit in complex with RRFmt and EF-G2mt.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.15 Å

Loop

Sequence

CUUAAAUAG

Length

9 nucleotides

Bulged bases

7L20|1|A|U|2618

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7L20_025 not in the Motif Atlas

Homologous match to HL_5J7L_182

Geometric discrepancy: 0.2456

The information below is about HL_5J7L_182

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_20167.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

10

Unit IDs

7L20|1|A|C|2612
7L20|1|A|U|2613
7L20|1|A|U|2614
7L20|1|A|A|2615
7L20|1|A|A|2616
7L20|1|A|A|2617
7L20|1|A|U|2618
7L20|1|A|A|2619
7L20|1|A|G|2620

Current chains

Chain A

16S rRNA mitochondrial

Nearby chains

Chain L

39S ribosomal protein L14, mitochondrial