HL_7L20_034

3D structure

PDB id

7L20 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human 39S mitoribosomal subunit in complex with RRFmt and EF-G2mt.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.15 Å

Loop

Sequence

UUGUUCA

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7L20_034 not in the Motif Atlas

Homologous match to HL_4WF9_058

Geometric discrepancy: 0.2807

The information below is about HL_4WF9_058

Detailed Annotation

LSU A loop

Broad Annotation

LSU A loop

Motif group

HL_48677.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

24

Unit IDs

7L20|1|A|U|3038
7L20|1|A|U|3039
7L20|1|A|G|3040
7L20|1|A|U|3041
7L20|1|A|U|3042
7L20|1|A|C|3043
7L20|1|A|A|3044

Current chains

Chain A

16S rRNA mitochondrial

Nearby chains

Chain z

Ribosome-recycling factor, mitochondrial