HL_7LH5_057

3D structure

PDB id

7LH5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with plazomicin, mRNA and tRNAs

Experimental method

X-RAY DIFFRACTION

Resolution

3.27 Å

Loop

Sequence

UGAAAAG

Length

7 nucleotides

Bulged bases

7LH5|1|BA|A|781, 7LH5|1|BA|A|784

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7LH5_057 not in the Motif Atlas

Homologous match to HL_7A0S_023

Geometric discrepancy: 0.1412

The information below is about HL_7A0S_023

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_51020.1

Basepair signature

cWW-cSW-F

Number of instances in this motif group

11

Unit IDs

7LH5|1|BA|U|779
7LH5|1|BA|G|780
7LH5|1|BA|A|781
7LH5|1|BA|A|782
7LH5|1|BA|A|783
7LH5|1|BA|A|784
7LH5|1|BA|G|785

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BD

50S ribosomal protein L2