HL_7LH5_120

3D structure

PDB id

7LH5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with plazomicin, mRNA and tRNAs

Experimental method

X-RAY DIFFRACTION

Resolution

3.27 Å

Loop

Sequence

GGUCUCC

Length

7 nucleotides

Bulged bases

7LH5|1|CA|U|839

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7LH5_120 not in the Motif Atlas

Geometric match to HL_1WZ2_007

Geometric discrepancy: 0.2082

The information below is about HL_1WZ2_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.7

Basepair signature

cWW-F

Number of instances in this motif group

22

Unit IDs

7LH5|1|CA|G|837
7LH5|1|CA|G|838
7LH5|1|CA|U|839
7LH5|1|CA|C|840
7LH5|1|CA|U|841
7LH5|1|CA|C|848
7LH5|1|CA|C|849

Current chains

Chain CA

16S ribosomal RNA

Nearby chains

Chain CB

30S ribosomal protein S2

Chain CR

30S ribosomal protein S18