HL_7LS2_004
3D structure
- PDB id
- 7LS2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome from mouse bound to eEF2 (Class I)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGCGUCG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7LS2_004 not in the Motif Atlas
- Geometric match to HL_4WF9_003
- Geometric discrepancy: 0.1395
- The information below is about HL_4WF9_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.10
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 24
Unit IDs
7LS2|1|A2|C|131
7LS2|1|A2|G|132
7LS2|1|A2|C|133
7LS2|1|A2|G|134
7LS2|1|A2|U|135
7LS2|1|A2|C|136
7LS2|1|A2|G|137
Current chains
- Chain A2
- 28S rRNA
Nearby chains
- Chain C2
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain H1
- 60S ribosomal protein L15
- Chain b2
- 60S ribosomal protein L35
- Chain d2
- 60S ribosomal protein L37
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