HL_7LS2_097
3D structure
- PDB id
- 7LS2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome from mouse bound to eEF2 (Class I)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UG(PSU)(PSU)CAAAG
- Length
- 9 nucleotides
- Bulged bases
- 7LS2|1|m2|G|823
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7LS2_097 not in the Motif Atlas
- Homologous match to HL_4V88_203
- Geometric discrepancy: 0.4745
- The information below is about HL_4V88_203
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_47383.2
- Basepair signature
- cWW-F-F-cWW-F-F
- Number of instances in this motif group
- 11
Unit IDs
7LS2|1|m2|U|822
7LS2|1|m2|G|823
7LS2|1|m2|PSU|824
7LS2|1|m2|PSU|825
7LS2|1|m2|C|826
7LS2|1|m2|A|827
7LS2|1|m2|A|828
7LS2|1|m2|A|829
7LS2|1|m2|G|830
Current chains
- Chain m2
- 18S rRNA
Nearby chains
- Chain L3
- 40S ribosomal protein S9
- Chain Q3
- 40S ribosomal protein S24
- Chain r2
- 40S ribosomal protein S4, X isoform
Coloring options: