HL_7LS2_099

3D structure

PDB id

7LS2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome from mouse bound to eEF2 (Class I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UAUUUUGUUGGUUUUCG

Length

17 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LS2|1|m2|U|887
7LS2|1|m2|A|888
7LS2|1|m2|U|889
7LS2|1|m2|U|890
7LS2|1|m2|U|891
7LS2|1|m2|U|892
7LS2|1|m2|G|893
7LS2|1|m2|U|894
7LS2|1|m2|U|895
7LS2|1|m2|G|896
7LS2|1|m2|G|897
7LS2|1|m2|U|898
7LS2|1|m2|U|899
7LS2|1|m2|U|900
7LS2|1|m2|U|901
7LS2|1|m2|C|902
7LS2|1|m2|G|903

Current chains

Chain m2

18S rRNA

Nearby chains

Chain w2

40S ribosomal protein S11