HL_7LV0_029

3D structure

PDB id

7LV0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation rotated ribosome +1-frameshifting(CCC-A) complex (Structure Irot-FS)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GCUUAUGC

Length

8 nucleotides

Bulged bases

7LV0|1|1|U|1174, 7LV0|1|1|A|1175

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7LV0_029 not in the Motif Atlas

Geometric match to HL_8C3A_022

Geometric discrepancy: 0.3386

The information below is about HL_8C3A_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

7LV0|1|1|G|1171
7LV0|1|1|C|1172
7LV0|1|1|U|1173
7LV0|1|1|U|1174
7LV0|1|1|A|1175
7LV0|1|1|U|1176
7LV0|1|1|G|1177
7LV0|1|1|C|1178

Current chains

Chain 1

23S ribosomal RNA

Nearby chains