HL_7LV0_039

3D structure

PDB id

7LV0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation rotated ribosome +1-frameshifting(CCC-A) complex (Structure Irot-FS)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CGACACAG

Length

8 nucleotides

Bulged bases

7LV0|1|1|A|1614, 7LV0|1|1|A|1616, 7LV0|1|1|A|1618

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7LV0_039 not in the Motif Atlas

Homologous match to HL_4WF9_038

Geometric discrepancy: 0.1258

The information below is about HL_4WF9_038

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_89567.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

8

Unit IDs

7LV0|1|1|C|1612
7LV0|1|1|G|1613
7LV0|1|1|A|1614
7LV0|1|1|C|1615
7LV0|1|1|A|1616
7LV0|1|1|C|1617
7LV0|1|1|A|1618
7LV0|1|1|G|1619

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain D

50S ribosomal protein L34

Chain s

50S ribosomal protein L22