HL_7LVK_006

3D structure

PDB id

7LVK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cfr-modified 50S subunit from Escherichia coli

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

GAAACAUC

Length

8 nucleotides

Bulged bases

7LVK|1|I|A|196

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7LVK_006 not in the Motif Atlas

Homologous match to HL_4WF9_006

Geometric discrepancy: 0.0648

The information below is about HL_4WF9_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_30068.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

15

Unit IDs

7LVK|1|I|G|194
7LVK|1|I|A|195
7LVK|1|I|A|196
7LVK|1|I|A|197
7LVK|1|I|C|198
7LVK|1|I|A|199
7LVK|1|I|U|200
7LVK|1|I|C|201

Current chains

Chain I

23S rRNA

Nearby chains

Chain T

50S ribosomal protein L15

Chain f

50S ribosomal protein L28