HL_7LVK_025

3D structure

PDB id

7LVK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cfr-modified 50S subunit from Escherichia coli

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

GUCACU

Length

6 nucleotides

Bulged bases

7LVK|1|I|A|892

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7LVK_025 not in the Motif Atlas

Geometric match to HL_4V88_198

Geometric discrepancy: 0.3965

The information below is about HL_4V88_198

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

7LVK|1|I|G|883
7LVK|1|I|U|884
7LVK|1|I|C|885
7LVK|1|I|A|892
7LVK|1|I|C|893
7LVK|1|I|U|894

Current chains

Chain I

23S rRNA

Nearby chains