HL_7LVK_059

3D structure

PDB id

7LVK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cfr-modified 50S subunit from Escherichia coli

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

UGAAUGGAAG

Length

10 nucleotides

Bulged bases

7LVK|1|I|A|2406

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7LVK_059 not in the Motif Atlas

Homologous match to HL_5J7L_192

Geometric discrepancy: 0.0619

The information below is about HL_5J7L_192

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_53454.2

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

6

Unit IDs

7LVK|1|I|U|2404
7LVK|1|I|G|2405
7LVK|1|I|A|2406
7LVK|1|I|A|2407
7LVK|1|I|U|2408
7LVK|1|I|G|2409
7LVK|1|I|G|2410
7LVK|1|I|A|2411
7LVK|1|I|A|2412
7LVK|1|I|G|2413

Current chains

Chain I

23S rRNA

Nearby chains

Chain T

50S ribosomal protein L15