HL_7M4W_007

3D structure

PDB id

7M4W (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-Eravacycline complex: 70S Empty

Experimental method

ELECTRON MICROSCOPY

Resolution

2.55 Å

Loop

Sequence

CAAUUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7M4W_007 not in the Motif Atlas

Geometric match to HL_3DIL_004

Geometric discrepancy: 0.2837

The information below is about HL_3DIL_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_78347.5

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

8

Unit IDs

7M4W|1|A|C|232
7M4W|1|A|A|233
7M4W|1|A|A|234
7M4W|1|A|U|235
7M4W|1|A|U|236
7M4W|1|A|G|237

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain K

50S ribosomal protein L15