HL_7M4W_013

3D structure

PDB id

7M4W (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-Eravacycline complex: 70S Empty

Experimental method

ELECTRON MICROSCOPY

Resolution

2.55 Å

Loop

Sequence

GGACCAUC

Length

8 nucleotides

Bulged bases

7M4W|1|A|G|410

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7M4W_013 not in the Motif Atlas

Homologous match to HL_7A0S_014

Geometric discrepancy: 0.0877

The information below is about HL_7A0S_014

Detailed Annotation

Pseudoknot geometry

Broad Annotation

No text annotation

Motif group

HL_30680.5

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7M4W|1|A|G|409
7M4W|1|A|G|410
7M4W|1|A|A|411
7M4W|1|A|C|412
7M4W|1|A|C|413
7M4W|1|A|A|414
7M4W|1|A|U|415
7M4W|1|A|C|416

Current chains

Chain A

23s ribosomal RNA

Nearby chains