HL_7M4W_055

3D structure

PDB id

7M4W (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-Eravacycline complex: 70S Empty

Experimental method

ELECTRON MICROSCOPY

Resolution

2.55 Å

Loop

Sequence

CCCACAAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7M4W_055 not in the Motif Atlas

Homologous match to HL_4WF9_053

Geometric discrepancy: 0.1671

The information below is about HL_4WF9_053

Detailed Annotation

GNRA with extra cWW

Broad Annotation

GNRA with extra cWW

Motif group

HL_45359.1

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

10

Unit IDs

7M4W|1|A|C|2351
7M4W|1|A|C|2352
7M4W|1|A|C|2353
7M4W|1|A|A|2354
7M4W|1|A|C|2355
7M4W|1|A|A|2356
7M4W|1|A|A|2357
7M4W|1|A|G|2358

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L35

Chain K

50S ribosomal protein L15

Chain V

50S ribosomal protein L27