HL_7M4W_058

3D structure

PDB id

7M4W (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-Eravacycline complex: 70S Empty

Experimental method

ELECTRON MICROSCOPY

Resolution

2.55 Å

Loop

Sequence

AGUUCAUAU

Length

9 nucleotides

Bulged bases

7M4W|1|A|U|2469

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7M4W_058 not in the Motif Atlas

Homologous match to HL_4WF9_056

Geometric discrepancy: 0.2002

The information below is about HL_4WF9_056

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_52011.1

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

9

Unit IDs

7M4W|1|A|A|2467
7M4W|1|A|G|2468
7M4W|1|A|U|2469
7M4W|1|A|U|2470
7M4W|1|A|C|2471
7M4W|1|A|A|2472
7M4W|1|A|U|2473
7M4W|1|A|A|2474
7M4W|1|A|U|2475

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain 3

50S ribosomal protein L36

Chain G

50S ribosomal protein L6