HL_7M4W_094

3D structure

PDB id

7M4W (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-Eravacycline complex: 70S Empty

Experimental method

ELECTRON MICROSCOPY

Resolution

2.55 Å

Loop

Sequence

GUUAAGUC

Length

8 nucleotides

Bulged bases

7M4W|1|a|G|1091

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7M4W_094 not in the Motif Atlas

Homologous match to HL_4LFB_025

Geometric discrepancy: 0.1375

The information below is about HL_4LFB_025

Detailed Annotation

T-loop related

Broad Annotation

T-loop

Motif group

HL_63894.1

Basepair signature

cWW-cWW-F-F-F

Number of instances in this motif group

18

Unit IDs

7M4W|1|a|G|1086
7M4W|1|a|U|1087
7M4W|1|a|U|1088
7M4W|1|a|A|1089
7M4W|1|a|A|1090
7M4W|1|a|G|1091
7M4W|1|a|U|1092
7M4W|1|a|C|1093

Current chains

Chain a

16s Ribosomal RNA

Nearby chains

Chain b

30S ribosomal protein S2

Chain g

30S ribosomal protein S7