HL_7M4W_097

3D structure

PDB id

7M4W (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-Eravacycline complex: 70S Empty

Experimental method

ELECTRON MICROSCOPY

Resolution

2.55 Å

Loop

Sequence

AGCGAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7M4W_097 not in the Motif Atlas

Homologous match to HL_4LFB_028

Geometric discrepancy: 0.1136

The information below is about HL_4LFB_028

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

7M4W|1|a|A|1262
7M4W|1|a|G|1263
7M4W|1|a|C|1264
7M4W|1|a|G|1265
7M4W|1|a|A|1266
7M4W|1|a|U|1267

Current chains

Chain a

16s Ribosomal RNA

Nearby chains

Chain m

30S ribosomal protein S13

Chain s

30S ribosomal protein S19