HL_7M4W_102

3D structure

PDB id

7M4W (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-Eravacycline complex: 70S Empty

Experimental method

ELECTRON MICROSCOPY

Resolution

2.55 Å

Loop

Sequence

(PSU)GCUAACG

Length

8 nucleotides

Bulged bases

7M4W|1|A|U|955, 7M4W|1|A|C|958

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7M4W_102 not in the Motif Atlas

Homologous match to HL_5J7L_211

Geometric discrepancy: 0.1084

The information below is about HL_5J7L_211

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

7M4W|1|A|PSU|952
7M4W|1|A|G|953
7M4W|1|A|C|954
7M4W|1|A|U|955
7M4W|1|A|A|956
7M4W|1|A|A|957
7M4W|1|A|C|958
7M4W|1|A|G|959

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain B

5S ribosomal RNA; 5S rRNA

Chain L

50S ribosomal protein L16