HL_7M4X_043

3D structure

PDB id

7M4X (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-Eravacycline complex: 70S with P-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.66 Å

Loop

Sequence

UUUAUUAAAAA

Length

11 nucleotides

Bulged bases

7M4X|1|A|A|1776, 7M4X|1|A|U|1777, 7M4X|1|A|U|1778, 7M4X|1|A|A|1782

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7M4X_043 not in the Motif Atlas

Homologous match to HL_5J7L_178

Geometric discrepancy: 0.1524

The information below is about HL_5J7L_178

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_01962.2

Basepair signature

cWW-tWH-tWH-F

Number of instances in this motif group

6

Unit IDs

7M4X|1|A|U|1773
7M4X|1|A|U|1774
7M4X|1|A|U|1775
7M4X|1|A|A|1776
7M4X|1|A|U|1777
7M4X|1|A|U|1778
7M4X|1|A|A|1779
7M4X|1|A|A|1780
7M4X|1|A|A|1781
7M4X|1|A|A|1782
7M4X|1|A|A|1783

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain 1

50S ribosomal protein L34

Chain C

50S ribosomal protein L2