HL_7M4X_052

3D structure

PDB id

7M4X (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-Eravacycline complex: 70S with P-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.66 Å

Loop

Sequence

CUAAAGAGUAACG

Length

13 nucleotides

Bulged bases

7M4X|1|A|A|2264, 7M4X|1|A|C|2271

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7M4X_052 not in the Motif Atlas

Homologous match to HL_5J7L_187

Geometric discrepancy: 0.1023

The information below is about HL_5J7L_187

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91939.2

Basepair signature

cWW-tSH-tHH-tWW-F-F-F

Number of instances in this motif group

8

Unit IDs

7M4X|1|A|C|2260
7M4X|1|A|U|2261
7M4X|1|A|A|2262
7M4X|1|A|A|2263
7M4X|1|A|A|2264
7M4X|1|A|G|2265
7M4X|1|A|A|2266
7M4X|1|A|G|2267
7M4X|1|A|U|2268
7M4X|1|A|A|2269
7M4X|1|A|A|2270
7M4X|1|A|C|2271
7M4X|1|A|G|2272

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain L

50S ribosomal protein L16

Chain V

50S ribosomal protein L27