HL_7M4X_078

3D structure

PDB id

7M4X (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-Eravacycline complex: 70S with P-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.66 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

7M4X|1|a|A|340

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7M4X_078 not in the Motif Atlas

Homologous match to HL_4LFB_009

Geometric discrepancy: 0.0774

The information below is about HL_4LFB_009

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

72

Unit IDs

7M4X|1|a|C|338
7M4X|1|a|U|339
7M4X|1|a|A|340
7M4X|1|a|C|341
7M4X|1|a|G|342
7M4X|1|a|G|343

Current chains

Chain a

16s Ribosomal RNA

Nearby chains

Chain J

50S ribosomal protein L14

Chain O

50S ribosomal protein L19