HL_7M4Z_023

3D structure

PDB id

7M4Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-Eravacycline complex: 70S with hpf

Experimental method

ELECTRON MICROSCOPY

Resolution

2.92 Å

Loop

Sequence

UGAAAGG

Length

7 nucleotides

Bulged bases

7M4Z|1|A|A|779, 7M4Z|1|A|G|782

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7M4Z_023 not in the Motif Atlas

Homologous match to HL_5J7L_156

Geometric discrepancy: 0.0873

The information below is about HL_5J7L_156

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_87954.2

Basepair signature

cWW-tSW-F

Number of instances in this motif group

7

Unit IDs

7M4Z|1|A|U|777
7M4Z|1|A|G|778
7M4Z|1|A|A|779
7M4Z|1|A|A|780
7M4Z|1|A|A|781
7M4Z|1|A|G|782
7M4Z|1|A|G|783

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L2