HL_7M4Z_038

3D structure

PDB id

7M4Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-Eravacycline complex: 70S with hpf

Experimental method

ELECTRON MICROSCOPY

Resolution

2.92 Å

Loop

Sequence

CGACACAG

Length

8 nucleotides

Bulged bases

7M4Z|1|A|A|1612, 7M4Z|1|A|A|1614, 7M4Z|1|A|A|1616

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7M4Z_038 not in the Motif Atlas

Homologous match to HL_4WF9_038

Geometric discrepancy: 0.0963

The information below is about HL_4WF9_038

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_28592.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

11

Unit IDs

7M4Z|1|A|C|1610
7M4Z|1|A|G|1611
7M4Z|1|A|A|1612
7M4Z|1|A|C|1613
7M4Z|1|A|A|1614
7M4Z|1|A|C|1615
7M4Z|1|A|A|1616
7M4Z|1|A|G|1617

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain 1

50S ribosomal protein L34

Chain R

50S ribosomal protein L22