HL_7M4Z_054

3D structure

PDB id

7M4Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-Eravacycline complex: 70S with hpf

Experimental method

ELECTRON MICROSCOPY

Resolution

2.92 Å

Loop

Sequence

UAUAAAGG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7M4Z_054 not in the Motif Atlas

Homologous match to HL_4WF9_052

Geometric discrepancy: 0.1523

The information below is about HL_4WF9_052

Detailed Annotation

Pseudoknot geometry

Broad Annotation

No text annotation

Motif group

HL_52651.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

29

Unit IDs

7M4Z|1|A|U|2320
7M4Z|1|A|A|2321
7M4Z|1|A|U|2322
7M4Z|1|A|A|2323
7M4Z|1|A|A|2324
7M4Z|1|A|A|2325
7M4Z|1|A|G|2326
7M4Z|1|A|G|2327

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain V

50S ribosomal protein L27