HL_7M4Z_062

3D structure

PDB id

7M4Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-Eravacycline complex: 70S with hpf

Experimental method

ELECTRON MICROSCOPY

Resolution

2.92 Å

Loop

Sequence

CGAGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7M4Z_062 not in the Motif Atlas

Geometric match to HL_7A0S_063

Geometric discrepancy: 0.1078

The information below is about HL_7A0S_063

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

7M4Z|1|A|C|2654
7M4Z|1|A|G|2655
7M4Z|1|A|A|2656
7M4Z|1|A|G|2657
7M4Z|1|A|A|2658
7M4Z|1|A|G|2659

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain G

50S ribosomal protein L6