HL_7M4Z_081

3D structure

PDB id

7M4Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-Eravacycline complex: 70S with hpf

Experimental method

ELECTRON MICROSCOPY

Resolution

2.92 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

7M4Z|1|a|U|463

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7M4Z_081 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.2872

The information below is about HL_5J7L_012

Detailed Annotation

GNRA wlth extra near cWW

Broad Annotation

GNRA wlth extra near cWW

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7M4Z|1|a|G|458
7M4Z|1|a|U|459
7M4Z|1|a|U|460
7M4Z|1|a|A|461
7M4Z|1|a|A|462
7M4Z|1|a|U|463
7M4Z|1|a|A|464
7M4Z|1|a|C|465
7M4Z|1|a|C|466

Current chains

Chain a

16s Ribosomal RNA

Nearby chains