HL_7M4Z_083

3D structure

PDB id

7M4Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-Eravacycline complex: 70S with hpf

Experimental method

ELECTRON MICROSCOPY

Resolution

2.92 Å

Loop

Sequence

GCUUAAC

Length

7 nucleotides

Bulged bases

7M4Z|1|a|U|616

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7M4Z_083 not in the Motif Atlas

Homologous match to HL_4LFB_014

Geometric discrepancy: 0.101

The information below is about HL_4LFB_014

Detailed Annotation

GNRA-like with tWH

Broad Annotation

GNRA

Motif group

HL_92337.1

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

3

Unit IDs

7M4Z|1|a|G|614
7M4Z|1|a|C|615
7M4Z|1|a|U|616
7M4Z|1|a|U|617
7M4Z|1|a|A|618
7M4Z|1|a|A|619
7M4Z|1|a|C|620

Current chains

Chain a

16s Ribosomal RNA

Nearby chains

Chain d

30S ribosomal protein S4

Chain p

30S ribosomal protein S16