HL_7M5D_029
3D structure
- PDB id
- 7M5D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a non-rotated E.coli 70S ribosome in complex with RF3-GTP, RF1 and P-tRNA (state I)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- CGUAAUAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7M5D_029 not in the Motif Atlas
- Geometric match to HL_5D8H_002
- Geometric discrepancy: 0.235
- The information below is about HL_5D8H_002
- Detailed Annotation
- GNRA wlth tandem sheared
- Broad Annotation
- No text annotation
- Motif group
- HL_98423.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 10
Unit IDs
7M5D|1|1|C|1092
7M5D|1|1|G|1093
7M5D|1|1|U|1094
7M5D|1|1|A|1095
7M5D|1|1|A|1096
7M5D|1|1|U|1097
7M5D|1|1|A|1098
7M5D|1|1|G|1099
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain A
- Peptide chain release factor 1
- Chain F
- 50S ribosomal protein L6
- Chain I
- 50S ribosomal protein L11
- Chain f
- 50S ribosomal protein L36
Coloring options: