HL_7M5D_061

3D structure

PDB id

7M5D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a non-rotated E.coli 70S ribosome in complex with RF3-GTP, RF1 and P-tRNA (state I)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

UGAAGUAG

Length

8 nucleotides

Bulged bases

7M5D|1|1|G|2529

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7M5D_061 not in the Motif Atlas

Geometric match to HL_5J7L_194

Geometric discrepancy: 0.1029

The information below is about HL_5J7L_194

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_31585.4

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

20

Unit IDs

7M5D|1|1|U|2528
7M5D|1|1|G|2529
7M5D|1|1|A|2530
7M5D|1|1|A|2531
7M5D|1|1|G|2532
7M5D|1|1|U|2533
7M5D|1|1|A|2534
7M5D|1|1|G|2535

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain F

50S ribosomal protein L6

Chain f

50S ribosomal protein L36