HL_7MDZ_109
3D structure
- PDB id
- 7MDZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S rabbit ribosome stalled with benzamide-CHX
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CCCG
- Length
- 4 nucleotides
- Bulged bases
- None detected
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7MDZ_109 not in the Motif Atlas
- Geometric match to HL_7KI3_001
- Geometric discrepancy: 0.1174
- The information below is about HL_7KI3_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.5
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 19
Unit IDs
7MDZ|1|9|C|1416
7MDZ|1|9|C|1417
7MDZ|1|9|C|1423
7MDZ|1|9|G|1424
Current chains
- Chain 9
- 18S rRNA
Nearby chains
- Chain QQ
- uS9
- Chain TT
- eS19
Coloring options: