HL_7MPI_049

3D structure

PDB id

7MPI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Stm1 bound vacant 80S structure isolated from cbf5-D95A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

GAGUAACUAUGACUC

Length

15 nucleotides

Bulged bases

7MPI|1|A1|A|2256

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7MPI|1|A1|G|2251
7MPI|1|A1|A|2252
7MPI|1|A1|G|2253
7MPI|1|A1|U|2254
7MPI|1|A1|A|2255
7MPI|1|A1|A|2256
7MPI|1|A1|C|2257
7MPI|1|A1|U|2258
7MPI|1|A1|A|2259
7MPI|1|A1|U|2260
7MPI|1|A1|G|2261
7MPI|1|A1|A|2262
7MPI|1|A1|C|2263
7MPI|1|A1|U|2264
7MPI|1|A1|C|2265

Current chains

Chain A1

25S rRNA

Nearby chains

Chain B5

Small subunit ribosomal RNA; SSU rRNA

Chain Be

40S ribosomal protein S30-A