HL_7MPI_054
3D structure
- PDB id
- 7MPI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stm1 bound vacant 80S structure isolated from cbf5-D95A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.05 Å
Loop
- Sequence
- CAUUCG
- Length
- 6 nucleotides
- Bulged bases
- 7MPI|1|A1|A|2569, 7MPI|1|A1|U|2571, 7MPI|1|A1|C|2572
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7MPI_054 not in the Motif Atlas
- Geometric match to HL_5TBW_071
- Geometric discrepancy: 0.2655
- The information below is about HL_5TBW_071
- Detailed Annotation
- Mini UNCG
- Broad Annotation
- No text annotation
- Motif group
- HL_43793.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 50
Unit IDs
7MPI|1|A1|C|2568
7MPI|1|A1|A|2569
7MPI|1|A1|U|2570
7MPI|1|A1|U|2571
7MPI|1|A1|C|2572
7MPI|1|A1|G|2573
Current chains
- Chain A1
- 25S rRNA
Nearby chains
- Chain AZ
- 60S ribosomal protein L27-A
Coloring options: