HL_7MPI_059

3D structure

PDB id

7MPI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Stm1 bound vacant 80S structure isolated from cbf5-D95A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

U(OMU)UCAG(OMU)GUGA

Length

11 nucleotides

Bulged bases

7MPI|1|A1|A|2727

QA status

Modified nucleotides: OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7MPI|1|A1|U|2723
7MPI|1|A1|OMU|2724
7MPI|1|A1|U|2725
7MPI|1|A1|C|2726
7MPI|1|A1|A|2727
7MPI|1|A1|G|2728
7MPI|1|A1|OMU|2729
7MPI|1|A1|G|2730
7MPI|1|A1|U|2731
7MPI|1|A1|G|2732
7MPI|1|A1|A|2733

Current chains

Chain A1

25S rRNA

Nearby chains

Chain AQ

60S ribosomal protein L18-A

Chain AT

60S ribosomal protein L21-A

Chain Aa

60S ribosomal protein L28

Chain Ab

60S ribosomal protein L29

Chain Ao

60S ribosomal protein L42-A