HL_7MPI_082

3D structure

PDB id

7MPI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Stm1 bound vacant 80S structure isolated from cbf5-D95A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

GUCUUCGGAC

Length

10 nucleotides

Bulged bases

7MPI|1|B5|U|229, 7MPI|1|B5|U|231, 7MPI|1|B5|U|232, 7MPI|1|B5|C|233, 7MPI|1|B5|G|234, 7MPI|1|B5|G|235, 7MPI|1|B5|A|236

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7MPI|1|B5|G|228
7MPI|1|B5|U|229
7MPI|1|B5|C|230
7MPI|1|B5|U|231
7MPI|1|B5|U|232
7MPI|1|B5|C|233
7MPI|1|B5|G|234
7MPI|1|B5|G|235
7MPI|1|B5|A|236
7MPI|1|B5|C|237

Current chains

Chain B5

18S rRNA

Nearby chains